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Zoologix performs avian and livestock PCR tests for...

Actinobacillus pleuropneumoniae

African swine fever

Akabane virus

Alcelaphine herpesvirus

AMPKγ3R200Q mutation in pigs

Anaplasma phagocytophilum

Aspergillus fumigatus

Aspergillus species

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Avian leukosis virus

Avian nephritis virus

Avian polyomavirus

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Avibacterium paragallinarum

Avipox virus

Balantidium coli

Baylisascaris procyonis

Blood typing for swine

Bluetongue virus

Bordetella avium

Borna virus

Bovine adenovirus

Bovine endogenous retrovirus

Bovine enterovirus

Bovine ephemeral fever virus

Bovine herpesvirus 1

Bovine herpesvirus 2

Bovine herpesvirus 4

Bovine leukemia virus

Bovine papillomavirus

Bovine papular stomatitis virus

Bovine parvovirus

Bovine polyomavirus

Bovine respiratory syncytial virus

Bovine rhinoviruses

Bovine viral diarrhea type 1

Brachyspira pilosicoli

Brucella

Cache Valley virus

Camelpox

Campylobacter      

Candida

Caprine arthritis-encephalitis (CAE) virus

Chicken anemia virus

Chlamydia/Chlamydophila genus

Chlamydophila psittaci

Classical swine fever

Clostridium

Coccidia

Coccidiodes

Coronaviruses

Cowpox

Coxiella burnetii

Cryptococcus

Cryptosporidium

Dientamoeba fragilis

Duck adenovirus

Ebola Reston

E. coli O157:h7

Edwardsiella

Encephalomyocarditis

Enteric E. coli panel

Erysipelothrix rhusiopathiae

Extraneous reticuloendotheliosis virus

Foot and mouth disease

Fowl adenovirus

Fowlpox

Fusobacterium necrophorum

Gallid herpesvirus 2

Hepatitis E

Herpes, avian

Histoplasma

Infectious bronchitis

Infectious bursal disease

Infectious coryza

Infectious laryngotracheitis

Influenza type A

Jaagsiekte sheep retrovirus (JSRV)

Japanese encephalitis

Jena virus

Johne's disease

Lawsonia intracellularis

Leptospira

Lumpy skin disease virus

Malaria

Malignant catarrhal fever (MCF)

Marek's disease virus

Mites

Mycobacterium avium and other Mycobacteria

Mycobacterium genavense

Mycoplasma species

Mycoplasma suis

Necator americanus (hookworm)

Newcastle disease virus

Nipah virus

Ornithobacterium rhinotracheale

Ovine herpesvirus 2

Pacheco's disease (psittacid herpesviruses)

Peste des petits ruminants virus (PPRV)

Pigeon circovirus

Plasmodium species

Porcine adenovirus

Porcine circovirus 1

Porcine circovirus 2

Porcine cytomegalovirus

Porcine endogenous retrovirus (PERV)

Porcine enterovirus

Porcine epidemic diarrhea virus

Porcine hemagglutinating encephalomyelitis

Porcine hemorrhagic enteropathy

Porcine intestinal adenomatosis

Porcine lymphotropic herpesvirus

Porcine parvovirus

Porcine reproductive & respiratory syndrome (PRRS) virus

Porcine respiratory coronavirus (PRCV)

Porcine transmissible gastroenteritis virus (TGEV)

Poultry respiratory panel

Pseudocowpox

Pseudorabies

Psittacine beak and feather disease

Psittacine herpes

Q fever

Rabies

Reovirus

Rift Valley fever virus

Rinderpest virus

RyR1 R615C mutation in pigs

Salmonella

Senecavirus A

Staphylococcus xylosus

St. Louis encephalitis

Streptococcus

Swinepox

Swine vesicular disease

Taenia (tapeworm)

Taenia solium (pork tapeworm)

Teschovirus (Teschen-Talfan disease)

Tickborne encephalitis virus

Trichinella spiralis

Trichomonas/
Tritrichomonas

Trichostrongylus

Vaccinia

Valley fever

Vesicular exanthema of swine

Vesicular stomatitis

Wesselsbron virus

West Nile virus

Yersinia enterocolitica

Yersinia pseudotuberculosis

...and more -- see the avian & livestock test menu for a complete listing of avian and livestock assays.

Dientamoeba fragilis PCR test

avian & livestock assay data sheet

Dientamoeba fragilis

Test code:
X0046 - Ultrasensitive qualitative detection of Dientamoeba fragilis by polymerase chain reaction.

Dientamoeba fragilis is a single-celled protozoan parasite that infects the human gastrointestinal tract and can also infect pigs, primates and other mammals. It is a flagellated protozoan closely related to trichomonads, and unlike many intestinal parasites, it lacks a cyst stage, existing only in its trophozoite form. This organism is found worldwide; its prevalence can be from 0% to over 80% depending on the geographic location, group studied, and diagnostic methods used.

It is debated whether this parasite is a harmless commensal or a mild pathogen. Studies have shown that this parasite is frequently detected in both symptomatic and asymptomatic individuals, with prevalence rates varying widely (0.2%–19% in general populations, but higher in specific groups like children in day care). Symptoms associated with this parasite, such as abdominal pain, diarrhea, bloating, and fatigue, are non-specific and can overlap with those of many other gastrointestinal conditions, making causation hard to establish. Additionally, D. fragilis does not invade tissues, lacks a cyst stage for easy transmission or survival outside the host, and is often found alongside other potential pathogens like pinworms (Enterobius vermicularis) or Blastocystis parasites, which could be the true culprits behind symptoms. Furthermore, antibody prevalence in healthy populations is very high, and carriers of this parasite do not seem to develop any chronic complications. These findings tend to support this parasite being a commensal.

D. fragilis spreads primarily through the fecal-oral route, often via contaminated food, water, or close contact with infected individuals. It may also be transmitted through pinworm eggs (Enterobius vermicularis), as the two parasites frequently co-infect (Girginkardeşler et al., 2008). Effective hygiene practices such as handwashing and proper sanitation are key to prevention.

Diagnosis is often by microscopic examination of fecal smears. However, the sensitivity and specificity of this method are low because the parasite is almost invisible in stool and is very fragile. PCR is increasingly being used to replace traditional methods, due to its high sensitivity and specificity (Stark et al., 2006; Tolba et al., 2022).

Utilities:

  • Help confirm the disease causing agent
  • Environmental monitoring
  • Help ensure that individual mammals are free of this parasite
  • Early prevention of spread of this parasite in herds and animal facilities
  • Minimize human exposure to this parasite
  • Safety monitoring of biological products and vaccines that derive from susceptible mammals

References:
Girginkardeşler N, Kurt O, Kilimcioğlu AA, Ok UZ. Transmission of Dientamoeba fragilis: evaluation of the role of Enterobius vermicularis. Parasitol Int. 2008 Mar;57(1):72-5.

Stark D, Beebe N, Marriott D, Ellis J, Harkness J. Evaluation of three diagnostic methods, including real-time PCR, for detection of Dientamoeba fragilis in stool specimens. J Clin Microbiol. 2006 Jan;44(1):232-5.

Tolba MM, Allam AF, Khalil SS, Elshouki WM, Shehab AY. Evaluation of microscopy and PCR for detection of Dientamoeba fragilis. Trop Parasitol. 2022 Jul-Dec;12(2):87-93.

Specimen requirements: 0.2 ml feces or fecal swab, or environmental swab, or 0.2 ml cell culture.

Contact Zoologix if advice is needed to determine an appropriate specimen type for a specific diagnostic application. For specimen types not listed here, please contact Zoologix to confirm specimen acceptability and shipping instructions.

For all specimen types, if there will be a delay in shipping, or during very warm weather, refrigerate specimens until shipped and ship with a cold pack unless more stringent shipping requirements are specified. Frozen specimens should be shipped so as to remain frozen in transit. See shipping instructions for more information.

Turnaround time: 2 business days

Methodology: Qualitative real time PCR

Normal range: Nondetected

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